Publications

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1994
Gough, William A., and William J. Welch. "Parameter space exploration of an ocean general circulation model using an isopycnal mixing parameterization." Journal of Marine Research 52 (1994): 773-796.
1995
Styer, P., N McMillan, F Gao, J Davis, and Jerome Sacks. "Effect of outdoor airborne particulate matter on daily death count." Environmental Health Perspectives 103 (1995): 490-497.
1996
Gao, Feng, Jerome Sacks, and William Welch. "Predicting ozone levels and trends with semiparametric modeling." Journal of Agricultural, Biological, and Environmental Statistics 1 (1996): 404-425.
1997
Nobile, Agostino, Chandra R. Bhat, and Eric I. Pas. "A Random-Effects Multinomial Probit Model of Car Ownership Choice." In Case Studies in Bayesian Statistics, edited by Constantine Gatsonis, JamesS. Hodges, RobertE. Kass, Robert McCulloch, Peter Rossi and NozerD. Singpurwalla, 419-434. Vol. 121. Lecture Notes in Statistics 121. Springer New York, 1997.
Xie, Minge, Douglas G. Simpson, and Raymond J. Carroll. "Scaled Link Functions for Heterogeneous Ordinal Response Data*." In Modelling Longitudinal and Spatially Correlated Data, edited by Timothy G. Gregoire, David R. Brillinger, PeterJ. Diggle, Estelle Russek-Cohen, William G. Warren and Russell D. Wolfinger, 23-36. Vol. 122. Lecture Notes in Statistics 122. Springer New York, 1997.
1998
Graves, Todd L., Mary Jean Harrold, Jung-Min Kim, Adam Porter, and Gregg Rothermel. "An Empirical Study of Regression Test Selection Techniques." In Proceedings of the 20th International Conference on Software Engineering, 188-197. ICSE ’98. Washington, DC, USA: IEEE Computer Society, 1998.
Graves, T.L., and A. Mockus. "Inferring change effort from configuration management databases." In Software Metrics Symposium, 1998. Metrics 1998. Proceedings. Fifth International, 267-273., 1998.
Karr, A. F., G. Eick, A. Mockus, and T.L. Graves. "SoftStat ?97: Advances in Statistical Software 6.", edited by W. Badilla and F. Faulbaum, 3-10. Lucius & Lucius, 1998.
Eick, G., A. Mockus, T.L. Graves, and A. F. Karr. "A Web laboratory for software data analysis." World Wide Web 1 (1998): 55-60.
2000
Young, S.Stanley, and Jerome Sacks. "Analysis of a Large, High-Throughput Screening Data Using Recursive Partitioning." In Molecular Modeling and Prediction of Bioactivity, edited by Klaus Gundertofte and Flemming Steen Jørgensen, 149-156. Springer US, 2000.
Graham, Jinko, James Curran, and Bruce Weir. "Conditional Genotypic Probabilities for Microsatellite Loci." Genetics 155 (2000): 1973-1980.
Karr, A. F., C.-M. Aldea, M. Ghandehari, and S. P. Shah. "Estimation of water flow through cracked concrete under load." ACI Materials Journal 97 (2000): 567?575.
Karr, A. F., S. G. Eick, T.L. Graves, J. S. Marron, and H. Siy. "Predicting fault incidence using software change history." IEEE Transportation Software Engineering 26 (2000): 653?661.
2001
Eick, Stephen G., Todd L. Graves, Alan F. Karr, J. S. Marron, and Audris Mockus. "Does code decay? Assessing the evidence from change management data." In In IEEE Transactions on Software Engineering, 1-12., 2001.
2002
Karr, A. F., T.L. Graves, A. Mockus, and P. Schuster. "Variability of travel times on arterial streets: effects of signals and volume." Transportation Research Record C 10 (2002): 000.
Eick, Stephen G., Paul Schuster, Audris Mockus, Todd L. Graves, and Alan F. Karr. "Visualizing Software Changes." INTERACTIONS 17 (2002): 29-31.
2003
Karr, A. F., S. Gomatam, C. Liu, and A. P. Sanil. "Data swapping: A risk–utility framework and Web service implementation." In Proc. dg.o 2003, National Conference on Digital Government Research, 245-248. Digital Government Research Center, 2003.
Sanil, Ashish, Shanti Gomatam, and Alan F. Karr. "NISS WebSwap: A Web Service for Data Swapping." J. Statist. Software 8 (2003): 2003.
2005
Gomatam, Shanti, Alan F. Karr, and Ashish P. Sanil. "Data Swapping as a Decision Problem." Journal of Official Statistics 21 (2005): 635-655.
Karr, Alan F., Xiaodong Lin, Ashish P. Sanil, and Jerome P. Reiter. "Secure statistical analysis of distributed databases using partially trusted third parties. Manuscript in preparation." In In Statistical Methods in Counterterrorism: Game Theory, Modeling, Syndromic Surveillance, and Biometric Authentication, edited by D. Olwell, A. G.Wilson and G. Wilson. New York: Springer–Verlag, 2005.
2007
Bayarri, M.J., J. Berger, G. Garcia-Donato, F. Liu, R. Paulo, Jerome Sacks, J. Palomo, D. Walsh, J. Cafeo, and R. Parthasarathy. "Computer Model Validation with Functional Output." Annals of Statistics 35, no. 5 (2007): 1874-190.
Karr, A. F., J. Ghosh, and J. P. Reiter. "Secure computation with horizontally partitioned data using adaptive regression splines." Journal of Computational Statistics and Data Analysis 51 (2007): 5813-5820.
2008
Karr, Alan F. "Citizen access to government statistical information.", edited by H. Chen, L. Brandt, V. Gregg, R. Traunmüller, S. Dawes, E. Hovy, A. Macintosh and C. A. Larson, 503-529. Springer US, 2008.
Fienberg, Stephen E. "Homeland Insecurity." In Terrorism Informatics, edited by Hsinchun Chen, Edna Reid, Joshua Sinai, Andrew Silke and Boaz Ganor, 197-218. Vol. 18. Integrated Series In Information Systems 18. Springer US, 2008.
2009
Fogel, P., C. Gobinet, S.S. Young, and D. Zugaj. "Evaluation of unmixing methods for the separation of Quantum Dot sources." In Hyperspectral Image and Signal Processing: Evolution in Remote Sensing, 2009. WHISPERS ’09. First Workshop on, 1-4., 2009.
2010
Karr, A. F., S. K. Kinney, and J. F. Gonzalez, Jr. "Data confidentiality—the next five years: Summary and guide to papers." Journal of Privacy and Confidentiality 1 (2010): 125-134.
Sedransk, N., J.M. Kulikowich, R. Engel, X. Wang, P. Gunning, and A. Fleming. "Psychometric and Statistical Modeling for the Study of Retention and Graduation in Undergraduate Engineering." In Social Statistics and Higher Education Conference Volume., 2010.
2012
JM, Hughes-Oliver, Brooks A, Welch W, Khaldei MG, Hawkins DM, Young SS, Patil K, Howell GW, Ng RT, and Chu MT. "ChemModLab: A web-based cheminromates modeling laboratory." Cheminformatics 11 (2012): 61-81.
2013
Abbatiello, S., X. Feng, N. Sedransk, DR Mani, B Schilling, B Maclean, LJ Zimmerman, MP Cusack, SC Hall, T Addona et al. "Design, Implementation and Multisite Evaluation of a System Suitability Protocol for the Quantitative Assessment of Instrument Performance in Liquid Chromatography-Multiple Reaction Monitoring-MS (LC-MRM-MS)." Molecular and Cellular Proteomics 12 (2013): 2623-2639.
Abbatiello, S., X. Feng, N. Sedransk, DR Mani, B Schilling, B Maclean, LJ Zimmerman, MP Cusack, SC Hall, T Addona et al. "Design, Implementation and Multisite Evaluation of a System Suitability Protocol for the Quantitative Assessment of Instrument Performance in Liquid Chromatography-Multiple Reaction Monitoring-MS (LC-MRM-MS)." Molecular and Cellular Proteomics 12 (2013): 2623-2639.
Leu, D., and N. Sedransk. "The New Literacies of Online Research and Comprehension: Assessing and Preparing Students for the 21st Century with Common Core State Standards." In Quality Reading Instruction in the Age of Common Core Standards, edited by S. Neuman and L. Gambrell. International Reading Association, 2013.
2014
Karr, A. F., J. Zou, G. S. Datta, S. Grannis, and J. Lynch. "A Bayesian spatio-temporal approach for real-time detection of disease outbreaks: A case study." BMC Medical Informatics and Decision Making 14 (2014).
Sedransk, N., D. Leu, E. Forzani, C. Burlingame, J. Kulikowich, J. Coiro, and C. Kennedy. "The New Literacies of Online Research and Comprehension: Assessing and Preparing Students for the 21st Century with Common Core State Standards.", edited by S. B. Neuman and L.B. Gambrell, to appear. International Reading Association, 2014.
2015
Abbatiello, Susan, Birgit Schilling, D.R. Mani, L.I. Shilling, S.C. Hall, B. McLean, M. Albetolle, S. Allen, M. Burgess, M.P. Cusack et al. "Large-Scale Interlaboratory Study to Develop, Analytically Validate and Apply Highly Multiplexed, Quantitative Peptide Assays to Measure Cancer-Relevant Proteins in Plasma." Molecular Cell Proteomics 14, no. 9 (2015): 2357-74.
2016
Sartore, L., P. Fabbri, and C. Gaetan. "spMC: an R-package for 3D Lithological Reconstructions Based on Spatial Markov Chains." Computers and Geosciences 94 (2016).