Publications

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2015
Abbatiello, Susan, Birgit Schilling, D.R. Mani, L.I. Shilling, S.C. Hall, B. McLean, M. Albetolle, S. Allen, M. Burgess, M.P. Cusack et al. "Large-Scale Interlaboratory Study to Develop, Analytically Validate and Apply Highly Multiplexed, Quantitative Peptide Assays to Measure Cancer-Relevant Proteins in Plasma." Molecular Cell Proteomics 14, no. 9 (2015): 2357-74.
Abbatiello, Susan, Birgit Schilling, D.R. Mani, L.I. Shilling, S.C. Hall, B. McLean, M. Albetolle, S. Allen, M. Burgess, M.P. Cusack et al. "Large-Scale Interlaboratory Study to Develop, Analytically Validate and Apply Highly Multiplexed, Quantitative Peptide Assays to Measure Cancer-Relevant Proteins in Plasma." Molecular Cell Proteomics 14, no. 9 (2015): 2357-74.
2013
Abbatiello, S., X. Feng, N. Sedransk, DR Mani, B Schilling, B Maclean, LJ Zimmerman, MP Cusack, SC Hall, T Addona et al. "Design, Implementation and Multisite Evaluation of a System Suitability Protocol for the Quantitative Assessment of Instrument Performance in Liquid Chromatography-Multiple Reaction Monitoring-MS (LC-MRM-MS)." Molecular and Cellular Proteomics 12 (2013): 2623-2639.
2011
Pauley, L., J. Kulikowich, N. Sedransk, and R. Engel. "Studying the Reliability and Validity of Test Scores for Mathematical and Spatial Reasoning Tasks for Engineering Students." In Proceedings, American Society for Engineering Education., 2011.
2010
Carr, Stephan A., Nell Sedransk., Henry Rodriguez, Zivana Tezak, Mehdi Mesri, Daniel C. Liebler, Susan J. Fisher, Paul Tempst, Tara Hiltke, Larry G. Kessler et al. "Analytical Validation of Proteomic-Based Multiplex Assays: A Workshop Report by the NCI-FDA Interagency Oncology Task Force on Molecular Diagnostics." Journal of Clinical Chemistry 56 (2010): 237-243.
Carr, Stephan A., Nell Sedransk., Henry Rodriguez, Zivana Tezak, Mehdi Mesri, Daniel C. Liebler, Susan J. Fisher, Paul Tempst, Tara Hiltke, Larry G. Kessler et al. "Analytical Validation of Proteomic-Based Multiplex Assays: A Workshop Report by the NCI-FDA Interagency Oncology Task Force on Molecular Diagnostics." Journal of Clinical Chemistry 56 (2010): 237-243.
Pauley, L., J.M. Kulikowich, N. Sedransk, and R. Engel. "Constructing mathematical and spatial-reasoning measures for engineering students." In Proceedings, American Society for Engineering Education., 2010.
2008
Last, Michael, Gheorghe Luta, Alex Orso, Adam Porter, and Stan Young. "Pooled ANOVA." Computational Statistics & Data Analysis 52 (2008): 5215.
2007
Bayarri, M.J., J. Berger, G. Garcia-Donato, F. Liu, R. Paulo, Jerome Sacks, J. Palomo, D. Walsh, J. Cafeo, and R. Parthasarathy. "Computer Model Validation with Functional Output." Annals of Statistics 35, no. 5 (2007): 1874-190.
Bayarri, M.J., J. Berger, G. Garcia-Donato, F. Liu, R. Paulo, Jerome Sacks, J. Palomo, D. Walsh, J. Cafeo, and R. Parthasarathy. "Computer Model Validation with Functional Output." Annals of Statistics 35, no. 5 (2007): 1874-190.
Bayarri, M.J., J. Berger, G. Garcia-Donato, F. Liu, R. Paulo, Jerome Sacks, J. Palomo, D. Walsh, J. Cafeo, and R. Parthasarathy. "Computer Model Validation with Functional Output." Annals of Statistics 35, no. 5 (2007): 1874-190.
Haran, Murali, Alan Karr, Michael Last, Alessandro Orso, Adam A. Porter, Ashish Sanil, and Sandro Fouché. "Techniques for classifying executions of deployed software to support software engineering tasks." IEEE TRANSACTIONS ON SOFTWARE ENGINEERING 33 (2007): 287-304.
2005
Karr, A. F., M. Haran, A. A. Porter, A. Orso, and A. P. Sanil. Applying classification techniques to remotely-collected program execution data In Proc. ACM SIGSOFT Symposium Foundations of Software Engineering 2005. New York: ACM, 2005.
Paulo, R. "Default Priors for Gaussian Processes." Annals of Statistics 33 (2005): 556-582.
Porter, A. A., and A. F. Karr. "Distributed performance testing using statistical modeling." In ICSE 2005 Workshop on Advances in Model-Based Software Testing (A-MOST)., 2005.
2003
Picka, Jeffrey D., and Karthik Chermakani. "Random-walk-based estimates of transport properties in small specimens of composite materials." Phys Rev E Stat Nonlin Soft Matter Phys 4 (2003).
2002
Ankenman, Bruce E., Hui Liu, Alan F. Karr, and Jeffrey D. Picka. "Experimental designs for estimating a response surface and variance components." Technometrics 44 (2002): 45-54.
Bayarri, M.J., J. Berger, D. Higdon, M. Kottas, R. Paulo, J. Sacks, J. Cafeo, J. Cavendish, C. Lin, and J. Tu. A Framework for Validating Computer Models In Workshop on Foundations for Modeling and Simulation. Society for Computer Simulation, 2002.
Bar-Gera, Hillel, and David Boyce. "Origin-based Network Assignment." In Transportation Planning, edited by Michael Patriksson and Martine Labbé, 1-17. Vol. 64. Applied Optimization 64. Springer US, 2002.
Bar-Gera, Hillel, and David Boyce. "Origin-based Network Assignment." In Transportation Planning, edited by Michael Patriksson and Martine Labbé, 1-17. Vol. 64. Applied Optimization 64. Springer US, 2002.
Paulo, R. Problems on the Bayesian-Frequentist Interface. Duke University, 2002.
Sacks, Jerome, Nagui M. Rouphail, Brian B. Park, and Piyushimita Thakuriah. "Statistically-Based Validation of Computer Simulation Models in Traffic Operations and Management." Journal of Transportation and Statistics 5 (2002).
2001
Park, Byungkyu, Nagui M. Rouphail, and Jerome Sacks. "Assessment of Stochastic Signal Optimization Method Using Microsimulation." Transportation Research Record 1748 (2001): 40-45.
Park, B., N. M. Rouphail, and J. Sacks. "A Framework for Traffic Simulation Model Validation Procedure Using CORSIM as a Test-Bed." In 2001 International Symposium on Advanced Highway Technology., 2001.
2000
Karr, A. F., N. Raghavan, R. Bell, M. Schonlau, and D. Pregibon. "Defection detection: Using online activity profiles to predict ISP customer vulnerability." In Proceedings of the Sixth International Conference on Knowledge Discovery and Data Mining, 506?515., 2000.
Rouphail, N., B. Park, and J. Sacks. Direct Signal Timing Optimization: Strategy Development and Results In XI Pan American Conference in Traffic and Transportation Engineering., 2000.
Karr, A. F., C.-M. Aldea, J.D. Picka, S. P. Shah, S.S. Jaiswal, and T. Igusa. "Experimental and statistical study of chloride permeability of cracked high strength concrete." ASTM Cement, Concrete and Aggregates 22 (2000): 000.
Karr, A. F., S. P. Shah, S.S. Jaiswal, B.E. Ankenman, J.D. Picka, and T. Igusa. "Impact of the interfacial transition zone on the chloride permeability of concrete." In Proc. 12th Engrg. Mechanics Conf, 1134-1137., 2000.
Kitamura, Ryuichi, Cynthia Chen, Ram M. Pendyala, and Ravi Narayanan. "Micro-simulation of daily activity-travel patterns for travel demand forecasting." Transportation 27 (2000): 25-51.
Karr, A. F., S.S. Jaiswal, T. Igusa, J.D. Picka, and S. P. Shah. "Quantitative description of coarse aggregate volume fraction gradients." Cement Concrete and Aggregates 22 (2000): 151-159.
Karr, A. F., S.S. Jaiswal, J.D. Picka, T. Igusa, S. P. Shah, B.E. Ankenman, and P. Styer. "Statistical studies of the conductivity of concrete using ASTM C1202?94." Concrete Science and Engineering 2 (2000): 97-105.
Park, B., N. M. Rouphail, and J. Sacks. Traffic Signal Offset Optimization Using Microscopic Simulation Program with Stochastic Process Model In American Society of Civil Engineers., 2000.
Picka, Jeffrey D. "Variance Reducing Modifications for Estimators of Standardized Moments of Random Sets." Advances in Applied Probability 32 (2000): 682-700.
Karr, A. F., C.-M. Aldea, S.S. Jaiswal, B.E. Ankenman, J.D. Picka, and T. Igusa. "Water permeability of cracked concrete." In Proc. 12th Engrg. Mechanics Conf, 1158?1162., 2000.
1998
Paddock, Susan, Michael West, Stanley S. Young, and M. Clyde. "Bayesian Mixture Models in Exploration of Structure-Activity Relationships in Drug Design." In Statistics in Science and Technology: Case Studies 4. Springer-Verlag, 1998.
Xie, Minge, and Douglas Simpson. "Categorical Exposure-Response Regression Analysis of Toxicology Experiments." In Case Studies in Environmental Statistics, edited by Douglas Nychka, Walter W. Piegorsch and Lawrence H. Cox, 121-141. Vol. 132. Lecture Notes in Statistics 132. Springer US, 1998.
Graves, Todd L., Mary Jean Harrold, Jung-Min Kim, Adam Porter, and Gregg Rothermel. "An Empirical Study of Regression Test Selection Techniques." In Proceedings of the 20th International Conference on Software Engineering, 188-197. ICSE ’98. Washington, DC, USA: IEEE Computer Society, 1998.
Cox, Lawrence H., Douglas Nychka, and Walter W. Piegorsch. "Introduction: Problems in Environmental Monitoring and Assessment." In Case Studies in Environmental Statistics, 1-4. Vol. 132. Lecture Notes in Statistics 132. Springer US, 1998.
Cox, Lawrence H. "Workshop: Statistical Methods for Combining Environmental Information." In Case Studies in Environmental Statistics, edited by Douglas Nychka, Walter W. Piegorsch and Lawrence H. Cox, 143-158. Vol. 132. Lecture Notes in Statistics 132. Springer US, 1998.
1997
Nobile, Agostino, Chandra R. Bhat, and Eric I. Pas. "A Random-Effects Multinomial Probit Model of Car Ownership Choice." In Case Studies in Bayesian Statistics, edited by Constantine Gatsonis, JamesS. Hodges, RobertE. Kass, Robert McCulloch, Peter Rossi and NozerD. Singpurwalla, 419-434. Vol. 121. Lecture Notes in Statistics 121. Springer New York, 1997.
1996
Karr, A. F., A. A. Porter, and L. G. Votta. "An empirical exploration of code evolution." In Proceedings of the InternationalWorkshop on Empirical Studies of Software Maintenance., 1996.